libpappsomspp
Library for mass spectrometry
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SpecGlobTool types definition. More...
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Namespaces | |
namespace | pappso |
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multicharge peaks to monocharge | |
namespace | pappso::specglob |
Enumerations | |
enum class | pappso::specglob::SpectralAlignmentType : std::uint8_t { pappso::specglob::nonAlign , pappso::specglob::reAlign = 1 , pappso::specglob::align = 2 } |
enum class | pappso::specglob::ScoreValueType : std::uint8_t { pappso::specglob::scoreNonAlign = 0 , pappso::specglob::scoreReAlignNative = 1 , pappso::specglob::scoreReAlignSym = 2 , pappso::specglob::scoreReAlignBoth = 3 , pappso::specglob::scoreAlignNative = 4 , pappso::specglob::scoreAlignSym = 5 , pappso::specglob::scoreAlignBoth = 6 , pappso::specglob::scoreReAlignNativeNO , pappso::specglob::scoreReAlignSymNO , pappso::specglob::scoreReAlignBothNO = 9 } |
enum class | pappso::specglob::ExperimentalSpectrumDataPointType : std::uint8_t { pappso::specglob::native = 0 , pappso::specglob::symetric , pappso::specglob::both , pappso::specglob::synthetic } |
SpecGlobTool types definition.
C++ implementation of the SpecGlob algorithm described in :
Prunier, G. et al. Fast alignment of mass spectra in large proteomics datasets, capturing dissimilarities arising from multiple complex modifications of peptides. BMC Bioinformatics 24, 421 (2023).
HAL Id : hal-04296170 , version 1 Mot de passe : hxo20cl DOI : 10.1186/s12859-023-05555-y
ANR founded project : https://anr.fr/Project-ANR-18-CE45-0004
Definition in file types.h.